Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.9□□□□□ -0.02
Trove2O08848 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Trove2O08848 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.9□□□□□ -0.02
Trove2O08848 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trove2O08848 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trove2O08848 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trove2O08848 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trove2O08848 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trove2O08848 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.89□□□□□ -0.03
Trove2O08848 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.89□□□□□ -0.03
Trove2O08848 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.89□□□□□ -0.03
Trove2O08848 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trove2O08848 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trove2O08848 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trove2O08848 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.89□□□□□ -0.03
Trove2O08848 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.89□□□□□ -0.03
Trove2O08848 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trove2O08848 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.89□□□□□ -0.03
Trove2O08848 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trove2O08848 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trove2O08848 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.88□□□□□ -0.03
Trove2O08848 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.88□□□□□ -0.03
Trove2O08848 Gm25990-201ENSMUST00000102440 86 ntBASIC14.88□□□□□ -0.03
Trove2O08848 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trove2O08848 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trove2O08848 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trove2O08848 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Trove2O08848 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.88□□□□□ -0.03
Trove2O08848 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trove2O08848 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trove2O08848 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trove2O08848 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trove2O08848 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Gm6089-201ENSMUST00000197666 938 ntBASIC14.87□□□□□ -0.03
Trove2O08848 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trove2O08848 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.87□□□□□ -0.03
Trove2O08848 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.87□□□□□ -0.03
Trove2O08848 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.87□□□□□ -0.03
Trove2O08848 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.87□□□□□ -0.03
Trove2O08848 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.87□□□□□ -0.03
Trove2O08848 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.87□□□□□ -0.03
Trove2O08848 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms