Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Gm8749-201ENSMUST00000117737 331 ntBASIC12.4□□□□□ -0.42
Casp6O08738 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Casp6O08738 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.4□□□□□ -0.42
Casp6O08738 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.4□□□□□ -0.42
Casp6O08738 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Gm37917-201ENSMUST00000194711 392 ntBASIC12.4□□□□□ -0.42
Casp6O08738 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.4□□□□□ -0.42
Casp6O08738 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.4□□□□□ -0.42
Casp6O08738 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Mir125a-201ENSMUST00000083545 68 ntBASIC12.4□□□□□ -0.42
Casp6O08738 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Casp6O08738 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Casp6O08738 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Casp6O08738 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Casp6O08738 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Casp6O08738 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Casp6O08738 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Casp6O08738 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.4□□□□□ -0.43
Casp6O08738 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.39□□□□□ -0.43
Casp6O08738 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.39□□□□□ -0.43
Casp6O08738 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.39□□□□□ -0.43
Casp6O08738 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Casp6O08738 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.39□□□□□ -0.43
Casp6O08738 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Gm9522-201ENSMUST00000182394 926 ntBASIC12.39□□□□□ -0.43
Casp6O08738 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Casp6O08738 Gm19220-201ENSMUST00000222682 803 ntBASIC12.39□□□□□ -0.43
Casp6O08738 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Casp6O08738 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Casp6O08738 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Casp6O08738 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Casp6O08738 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Casp6O08738 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Casp6O08738 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Casp6O08738 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Casp6O08738 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Gm6912-201ENSMUST00000117218 544 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.38□□□□□ -0.43
Casp6O08738 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Gm28760-201ENSMUST00000185995 736 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Gm43703-201ENSMUST00000200523 763 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.38□□□□□ -0.43
Casp6O08738 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.38□□□□□ -0.43
Casp6O08738 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Casp6O08738 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Casp6O08738 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Casp6O08738 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms