Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-1G3UXB3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm12384-201ENSMUST00000119228 919 ntBASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm22094-201ENSMUST00000158976 117 ntBASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm25037-201ENSMUST00000175418 110 ntBASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm42796-201ENSMUST00000199913 1087 ntBASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx1-1G3UXB3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm11628-201ENSMUST00000117568 171 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm27516-201ENSMUST00000184237 98 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Mir8109-201ENSMUST00000184375 117 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm38154-201ENSMUST00000195444 340 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm9023-201ENSMUST00000198408 1038 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm40466-201ENSMUST00000212174 422 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm7688-201ENSMUST00000212857 337 ntBASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx1-1G3UXB3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx1-1G3UXB3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx1-1G3UXB3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms