Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Colca2F8VPY8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm8927-201ENSMUST00000181978 981 ntBASIC13.58□□□□□ -0.24
Colca2F8VPY8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm3222-201ENSMUST00000071282 990 ntBASIC13.58□□□□□ -0.24
Colca2F8VPY8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.58□□□□□ -0.24
Colca2F8VPY8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Colca2F8VPY8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Colca2F8VPY8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.57□□□□□ -0.24
Colca2F8VPY8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.57□□□□□ -0.24
Colca2F8VPY8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.57□□□□□ -0.24
Colca2F8VPY8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.57□□□□□ -0.24
Colca2F8VPY8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Colca2F8VPY8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.56□□□□□ -0.24
Colca2F8VPY8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.56□□□□□ -0.24
Colca2F8VPY8 Gm16177-201ENSMUST00000120728 718 ntBASIC13.56□□□□□ -0.24
Colca2F8VPY8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Gm38223-201ENSMUST00000194484 695 ntBASIC13.56□□□□□ -0.24
Colca2F8VPY8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Colca2F8VPY8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.56□□□□□ -0.24
Colca2F8VPY8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.56□□□□□ -0.24
Colca2F8VPY8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms