Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Cts7-204ENSMUST00000225321 1257 ntBASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf11E9PZM7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gm27331-201ENSMUST00000183705 60 ntBASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gm38341-201ENSMUST00000195357 515 ntBASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Gm17823-201ENSMUST00000217830 1006 ntBASIC19.88■□□□□ 0.77
Scaf11E9PZM7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf11E9PZM7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Gm12882-201ENSMUST00000121696 517 ntBASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scaf11E9PZM7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Gm8810-201ENSMUST00000172895 754 ntBASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Gm11793-201ENSMUST00000120433 981 ntBASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Proscos-202ENSMUST00000178990 666 ntBASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scaf11E9PZM7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scaf11E9PZM7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms