Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Srp54bE9PXC0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.25□□□□□ -0.13
Srp54bE9PXC0 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.25□□□□□ -0.13
Srp54bE9PXC0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Asic1-205ENSMUST00000228185 1818 ntBASIC14.25□□□□□ -0.13
Srp54bE9PXC0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm15321-201ENSMUST00000121290 288 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm11424-201ENSMUST00000121929 829 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm3436-201ENSMUST00000179930 840 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm24694-201ENSMUST00000180054 110 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm27663-201ENSMUST00000184839 110 ntBASIC14.24□□□□□ -0.13
Srp54bE9PXC0 Gm43703-201ENSMUST00000200523 763 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms