Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.2□□□□□ -0.46
Col6a4A2AX52 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm12742-201ENSMUST00000117326 410 ntBASIC12.2□□□□□ -0.46
Col6a4A2AX52 Gm13226-201ENSMUST00000117838 404 ntBASIC12.2□□□□□ -0.46
Col6a4A2AX52 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.2□□□□□ -0.46
Col6a4A2AX52 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a4A2AX52 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 BC001981-202ENSMUST00000191393 1545 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gm37917-201ENSMUST00000194711 392 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gm15678-201ENSMUST00000117573 960 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gm15806-201ENSMUST00000120696 955 ntBASIC12.19□□□□□ -0.46
Col6a4A2AX52 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a4A2AX52 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.18□□□□□ -0.46
Col6a4A2AX52 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.18□□□□□ -0.46
Col6a4A2AX52 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Gm5356-201ENSMUST00000093326 615 ntBASIC12.18□□□□□ -0.46
Col6a4A2AX52 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms