Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Ccdc112A0AUP1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Gm12350-201ENSMUST00000121208 462 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Gm18195-201ENSMUST00000207604 706 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Gm9182-201ENSMUST00000217829 639 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc112A0AUP1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc112A0AUP1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms