Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm9682-201ENSMUST00000197505 556 ntBASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm18669-201ENSMUST00000216049 778 ntBASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm37153-201ENSMUST00000193637 231 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms