Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Gm18041-201ENSMUST00000218210 618 ntBASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav7n-4A0A075B620 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Grk6-205ENSMUST00000224653 2976 ntBASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav7n-4A0A075B620 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Gm6623-201ENSMUST00000173570 544 ntBASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Gm22697-201ENSMUST00000175194 63 ntBASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trav7n-4A0A075B620 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms