Protein–RNA interactions for Protein: Q9Z1N5

Ddx39b, Spliceosome RNA helicase Ddx39b, mousemouse

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39bQ9Z1N5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx39bQ9Z1N5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Gm13464-201ENSMUST00000119418 935 ntBASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Gm23547-201ENSMUST00000158210 271 ntBASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Gm27301-201ENSMUST00000184012 127 ntBASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Gm17968-201ENSMUST00000194902 784 ntBASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx39bQ9Z1N5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Gm2272-201ENSMUST00000194903 582 ntBASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx39bQ9Z1N5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Gm9385-201ENSMUST00000117563 472 ntBASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.55□□□□□ -0.08
Ddx39bQ9Z1N5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms