Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm7399-201ENSMUST00000032395 858 ntBASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm7287-201ENSMUST00000205267 602 ntBASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-4Q9EQM3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm29649-201ENSMUST00000185649 419 ntBASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-4Q9EQM3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.77□□□□□ -0.04
Nkx2-4Q9EQM3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms