Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp4cQ9D7F7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp4cQ9D7F7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Gm27741-201ENSMUST00000185060 237 ntBASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4cQ9D7F7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Gm12008-201ENSMUST00000117791 755 ntBASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms