Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Gm43474-201ENSMUST00000196415 774 ntBASIC15.42■□□□□ 0.06
Gm3404Q9D506 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm3404Q9D506 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.42■□□□□ 0.06
Gm3404Q9D506 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.41■□□□□ 0.06
Gm3404Q9D506 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm2810-201ENSMUST00000118681 990 ntBASIC15.41■□□□□ 0.06
Gm3404Q9D506 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm18737-201ENSMUST00000173594 937 ntBASIC15.41■□□□□ 0.06
Gm3404Q9D506 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm38225-201ENSMUST00000194001 393 ntBASIC15.41■□□□□ 0.06
Gm3404Q9D506 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm3404Q9D506 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Gm3404Q9D506 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.4■□□□□ 0.06
Gm3404Q9D506 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Gm14701-201ENSMUST00000117156 348 ntBASIC15.4■□□□□ 0.06
Gm3404Q9D506 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.4■□□□□ 0.06
Gm3404Q9D506 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.4■□□□□ 0.06
Gm3404Q9D506 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Olfr286-202ENSMUST00000205305 969 ntBASIC15.4■□□□□ 0.06
Gm3404Q9D506 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm3404Q9D506 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Gm3404Q9D506 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.06
Gm3404Q9D506 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm3404Q9D506 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms