Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lonrf3Q9D4H7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lonrf3Q9D4H7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lonrf3Q9D4H7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lonrf3Q9D4H7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm29310-201ENSMUST00000185468 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21825-201ENSMUST00000185728 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm29109-201ENSMUST00000185895 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21896-201ENSMUST00000186520 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21873-201ENSMUST00000186728 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21794-201ENSMUST00000187056 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21880-201ENSMUST00000187275 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21826-201ENSMUST00000187451 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21198-201ENSMUST00000188393 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21749-201ENSMUST00000189343 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21901-201ENSMUST00000189568 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm29424-201ENSMUST00000189716 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm28599-201ENSMUST00000189838 694 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21867-201ENSMUST00000189917 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm29269-201ENSMUST00000190087 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21722-201ENSMUST00000190153 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm28423-201ENSMUST00000190701 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21899-201ENSMUST00000190745 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21910-201ENSMUST00000191163 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21849-201ENSMUST00000191571 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm28678-201ENSMUST00000191593 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm20910-201ENSMUST00000193268 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm21871-201ENSMUST00000194621 696 ntBASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lonrf3Q9D4H7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms