Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd2Q9CZB3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd2Q9CZB3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd2Q9CZB3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Thumpd2Q9CZB3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gm2272-201ENSMUST00000194903 582 ntBASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gm2451-201ENSMUST00000199447 999 ntBASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gm10290-201ENSMUST00000200451 999 ntBASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Thumpd2Q9CZB3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Thumpd2Q9CZB3 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.21■□□□□ 0.02
Thumpd2Q9CZB3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Thumpd2Q9CZB3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms