Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Mrpl55Q9CZ83 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm4609-201ENSMUST00000106443 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm5138-201ENSMUST00000113842 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm15191-201ENSMUST00000117933 1000 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm12182-201ENSMUST00000118655 1008 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm13882-201ENSMUST00000120886 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm10284-201ENSMUST00000145057 1005 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm10481-201ENSMUST00000179228 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm2574-201ENSMUST00000181051 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm3200-201ENSMUST00000181493 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm8825-201ENSMUST00000182565 998 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm4518-201ENSMUST00000182638 718 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm8349-201ENSMUST00000182720 1003 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm8330-201ENSMUST00000182754 1008 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm4575-201ENSMUST00000182991 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm8709-201ENSMUST00000183230 1012 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm10293-201ENSMUST00000076317 1002 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm6316-201ENSMUST00000082064 1020 ntBASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Mrpl55Q9CZ83 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Mrpl55Q9CZ83 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms