Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.08■□□□□ 0.32
Smc3Q9CW03 Gm2451-201ENSMUST00000199447 999 ntBASIC17.08■□□□□ 0.32
Smc3Q9CW03 Gm10290-201ENSMUST00000200451 999 ntBASIC17.08■□□□□ 0.32
Smc3Q9CW03 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smc3Q9CW03 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Gm13597-201ENSMUST00000121239 375 ntBASIC17.07■□□□□ 0.32
Smc3Q9CW03 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Gm2272-201ENSMUST00000194903 582 ntBASIC17.07■□□□□ 0.32
Smc3Q9CW03 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smc3Q9CW03 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.06■□□□□ 0.32
Smc3Q9CW03 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Mir5126-201ENSMUST00000175513 77 ntBASIC17.06■□□□□ 0.32
Smc3Q9CW03 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smc3Q9CW03 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.05■□□□□ 0.32
Smc3Q9CW03 Olfr286-202ENSMUST00000205305 969 ntBASIC17.05■□□□□ 0.32
Smc3Q9CW03 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smc3Q9CW03 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc3Q9CW03 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms