Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldnd1Q9CQX5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm2495-201ENSMUST00000191160 466 ntBASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm5425-201ENSMUST00000214125 459 ntBASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cldnd1Q9CQX5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm11814-201ENSMUST00000119515 929 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm27847-201ENSMUST00000183711 107 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm27375-201ENSMUST00000183799 107 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.74□□□□□ -0.05
Cldnd1Q9CQX5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms