Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Gm8344-201ENSMUST00000119813 856 ntBASIC12.38□□□□□ -0.43
Smim3Q99PE5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Gm43767-201ENSMUST00000198933 381 ntBASIC12.38□□□□□ -0.43
Smim3Q99PE5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smim3Q99PE5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Gm18622-201ENSMUST00000219361 595 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.37□□□□□ -0.43
Smim3Q99PE5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smim3Q99PE5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.36□□□□□ -0.43
Smim3Q99PE5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.36□□□□□ -0.43
Smim3Q99PE5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smim3Q99PE5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smim3Q99PE5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms