Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Gm43125-201ENSMUST00000201724 730 ntBASIC18.69■□□□□ 0.58
Rtn4Q99P72 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.69■□□□□ 0.58
Rtn4Q99P72 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.69■□□□□ 0.58
Rtn4Q99P72 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4Q99P72 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rtn4Q99P72 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Gm43980-201ENSMUST00000204899 1612 ntBASIC18.68■□□□□ 0.58
Rtn4Q99P72 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Rtn4Q99P72 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm25948-201ENSMUST00000175334 112 ntBASIC18.67■□□□□ 0.58
Rtn4Q99P72 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.67■□□□□ 0.58
Rtn4Q99P72 AC154848.1-201ENSMUST00000225451 846 ntBASIC18.67■□□□□ 0.58
Rtn4Q99P72 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.67■□□□□ 0.58
Rtn4Q99P72 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4Q99P72 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC18.66■□□□□ 0.58
Rtn4Q99P72 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Gm44872-201ENSMUST00000207864 420 ntBASIC18.66■□□□□ 0.58
Rtn4Q99P72 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4Q99P72 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms