Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf111Q99ML9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.08□□□□□ -0.16
Rnf111Q99ML9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf111Q99ML9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf111Q99ML9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf111Q99ML9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms