Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.06■□□□□ 0
Lysmd3Q99LE3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.06■□□□□ 0
Lysmd3Q99LE3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Gm20949-201ENSMUST00000206478 952 ntBASIC15.06■□□□□ 0
Lysmd3Q99LE3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd3Q99LE3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Lysmd3Q99LE3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Mir7023-201ENSMUST00000185093 64 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm17837-201ENSMUST00000186435 985 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.05■□□□□ -0
Lysmd3Q99LE3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Lysmd3Q99LE3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.04■□□□□ -0
Lysmd3Q99LE3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms