Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gm9726-201ENSMUST00000180321 678 ntBASIC16.68■□□□□ 0.26
Rfc4Q99J62 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gm44719-201ENSMUST00000206404 149 ntBASIC16.68■□□□□ 0.26
Rfc4Q99J62 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.68■□□□□ 0.26
Rfc4Q99J62 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gm19220-201ENSMUST00000222682 803 ntBASIC16.68■□□□□ 0.26
Rfc4Q99J62 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfc4Q99J62 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.67■□□□□ 0.26
Rfc4Q99J62 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.67■□□□□ 0.26
Rfc4Q99J62 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfc4Q99J62 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Gm12585-201ENSMUST00000117307 290 ntBASIC16.66■□□□□ 0.26
Rfc4Q99J62 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfc4Q99J62 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Gm15806-201ENSMUST00000120696 955 ntBASIC16.65■□□□□ 0.26
Rfc4Q99J62 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.65■□□□□ 0.26
Rfc4Q99J62 Mir7085-201ENSMUST00000184353 66 ntBASIC16.65■□□□□ 0.26
Rfc4Q99J62 Gm6916-202ENSMUST00000205523 195 ntBASIC16.65■□□□□ 0.26
Rfc4Q99J62 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.65■□□□□ 0.26
Rfc4Q99J62 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfc4Q99J62 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms