Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.24□□□□□ -0.13
Smim11aQ99J19 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.24□□□□□ -0.13
Smim11aQ99J19 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.24□□□□□ -0.13
Smim11aQ99J19 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim11aQ99J19 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 AV026068-213ENSMUST00000223675 1171 ntBASIC14.23□□□□□ -0.13
Smim11aQ99J19 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim11aQ99J19 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Gm7862-201ENSMUST00000121461 292 ntBASIC14.22□□□□□ -0.13
Smim11aQ99J19 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim11aQ99J19 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms