Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.09■□□□□ 0.33
Col20a1Q923P0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Syt7-205ENSMUST00000224135 1557 ntBASIC17.09■□□□□ 0.33
Col20a1Q923P0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Sybu-209ENSMUST00000228639 4113 ntBASIC17.08■□□□□ 0.33
Col20a1Q923P0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.08■□□□□ 0.33
Col20a1Q923P0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.08■□□□□ 0.33
Col20a1Q923P0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Gm6916-202ENSMUST00000205523 195 ntBASIC17.08■□□□□ 0.32
Col20a1Q923P0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.08■□□□□ 0.32
Col20a1Q923P0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col20a1Q923P0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Gm20445-201ENSMUST00000061905 565 ntBASIC17.07■□□□□ 0.32
Col20a1Q923P0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col20a1Q923P0 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.07■□□□□ 0.32
Col20a1Q923P0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Gm33320-201ENSMUST00000192232 530 ntBASIC17.06■□□□□ 0.32
Col20a1Q923P0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.06■□□□□ 0.32
Col20a1Q923P0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col20a1Q923P0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms