Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Efs-202ENSMUST00000227037 2540 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm11652-201ENSMUST00000117842 1267 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm13365-201ENSMUST00000121188 973 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 AC134439.1-201ENSMUST00000220923 600 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb17Q91VD8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm15225-201ENSMUST00000120449 1017 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm18737-201ENSMUST00000173594 937 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm44038-201ENSMUST00000203952 889 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 AC116589.4-201ENSMUST00000222390 216 ntBASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb17Q91VD8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms