Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cd109Q8R422 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd109Q8R422 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cd109Q8R422 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cd109Q8R422 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.39■□□□□ 0.85
Cd109Q8R422 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cd109Q8R422 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.39■□□□□ 0.85
Cd109Q8R422 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd109Q8R422 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Cd109Q8R422 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.38■□□□□ 0.85
Cd109Q8R422 Gm17150-201ENSMUST00000165577 381 ntBASIC20.38■□□□□ 0.85
Cd109Q8R422 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cd109Q8R422 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Mir7085-201ENSMUST00000184353 66 ntBASIC20.38■□□□□ 0.85
Cd109Q8R422 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cd109Q8R422 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.38■□□□□ 0.85
Cd109Q8R422 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd109Q8R422 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cd109Q8R422 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Gm9002-201ENSMUST00000178437 499 ntBASIC20.37■□□□□ 0.85
Cd109Q8R422 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cd109Q8R422 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.37■□□□□ 0.85
Cd109Q8R422 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cd109Q8R422 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.37■□□□□ 0.85
Cd109Q8R422 Ssr1-204ENSMUST00000225319 1610 ntBASIC20.37■□□□□ 0.85
Cd109Q8R422 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd109Q8R422 Gm13829-201ENSMUST00000119600 138 ntBASIC20.36■□□□□ 0.85
Cd109Q8R422 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.36■□□□□ 0.85
Cd109Q8R422 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cd109Q8R422 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cd109Q8R422 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Cd109Q8R422 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.36■□□□□ 0.85
Cd109Q8R422 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.36■□□□□ 0.85
Cd109Q8R422 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd109Q8R422 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC20.36■□□□□ 0.85
Cd109Q8R422 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.35■□□□□ 0.85
Cd109Q8R422 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Gm6266-201ENSMUST00000203844 806 ntBASIC20.35■□□□□ 0.85
Cd109Q8R422 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.35■□□□□ 0.85
Cd109Q8R422 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Cd109Q8R422 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd109Q8R422 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC20.34■□□□□ 0.85
Cd109Q8R422 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms