Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm11543-201ENSMUST00000120758 370 ntBASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm5264-201ENSMUST00000190584 848 ntBASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim29Q8R2Q0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm15483-201ENSMUST00000120338 456 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm11025-201ENSMUST00000140773 466 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim29Q8R2Q0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Gm14042-201ENSMUST00000120139 833 ntBASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.55■□□□□ 0.24
Trim29Q8R2Q0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms