Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm27533-201ENSMUST00000183800 152 ntBASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm6888-201ENSMUST00000221983 706 ntBASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm24543-201ENSMUST00000103867 82 ntBASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm25144-201ENSMUST00000179561 110 ntBASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm25352-201ENSMUST00000179815 110 ntBASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm17837-201ENSMUST00000186435 985 ntBASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Rpp40Q8R1F9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rpp40Q8R1F9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Gm10576-201ENSMUST00000191927 825 ntBASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rpp40Q8R1F9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Gm45453-201ENSMUST00000211758 853 ntBASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Dupd1-202ENSMUST00000224735 548 ntBASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms