Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm27920-201ENSMUST00000183953 96 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm45098-201ENSMUST00000207179 657 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.69□□□□□ -0.22
Clrn1Q8K445 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Olfr286-202ENSMUST00000205305 969 ntBASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gm45612-201ENSMUST00000211320 160 ntBASIC13.69□□□□□ -0.22
Clrn1Q8K445 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.69□□□□□ -0.22
Clrn1Q8K445 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.69□□□□□ -0.22
Clrn1Q8K445 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clrn1Q8K445 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Gm11745-201ENSMUST00000121669 448 ntBASIC13.68□□□□□ -0.22
Clrn1Q8K445 Gm14822-201ENSMUST00000122247 291 ntBASIC13.68□□□□□ -0.22
Clrn1Q8K445 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Gm5479-201ENSMUST00000160578 435 ntBASIC13.68□□□□□ -0.22
Clrn1Q8K445 Gm27397-201ENSMUST00000184997 107 ntBASIC13.68□□□□□ -0.22
Clrn1Q8K445 Gm9182-201ENSMUST00000217829 639 ntBASIC13.68□□□□□ -0.22
Clrn1Q8K445 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clrn1Q8K445 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn1Q8K445 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn1Q8K445 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms