Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.14□□□□□ -0.95
Cystm1Q8K353 Mzt1-203ENSMUST00000227948 952 ntBASIC9.14□□□□□ -0.95
Cystm1Q8K353 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.14□□□□□ -0.95
Cystm1Q8K353 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gm15165-201ENSMUST00000118140 502 ntBASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gm12644-201ENSMUST00000119935 606 ntBASIC9.13□□□□□ -0.95
Cystm1Q8K353 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 AC121801.1-201ENSMUST00000225363 1899 ntBASIC9.13□□□□□ -0.95
Cystm1Q8K353 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.13□□□□□ -0.95
Cystm1Q8K353 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cystm1Q8K353 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cystm1Q8K353 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms