Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shtn1Q8K2Q9 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shtn1Q8K2Q9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm12341-201ENSMUST00000119724 503 ntBASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm9002-201ENSMUST00000178437 499 ntBASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Gm28911-201ENSMUST00000188837 117 ntBASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shtn1Q8K2Q9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms