Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cchcr1Q8K2I2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Gm45098-201ENSMUST00000207179 657 ntBASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cchcr1Q8K2I2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Psmb5-202ENSMUST00000227257 622 ntBASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cchcr1Q8K2I2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Cchcr1Q8K2I2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cchcr1Q8K2I2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cchcr1Q8K2I2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cchcr1Q8K2I2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms