Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.83□□□□□ -0.04
CopaQ8CIE6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CopaQ8CIE6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.82□□□□□ -0.04
CopaQ8CIE6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm23547-201ENSMUST00000158210 271 ntBASIC14.82□□□□□ -0.04
CopaQ8CIE6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm43125-201ENSMUST00000201724 730 ntBASIC14.82□□□□□ -0.04
CopaQ8CIE6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.82□□□□□ -0.04
CopaQ8CIE6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CopaQ8CIE6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.81□□□□□ -0.04
CopaQ8CIE6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.81□□□□□ -0.04
CopaQ8CIE6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.81□□□□□ -0.04
CopaQ8CIE6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
CopaQ8CIE6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms