Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trim52Q8CDV4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Mir6392-201ENSMUST00000184924 108 ntBASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Gm37714-201ENSMUST00000194742 342 ntBASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Gm45384-201ENSMUST00000210451 277 ntBASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim52Q8CDV4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Gm15240-201ENSMUST00000118156 720 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Gm5425-201ENSMUST00000214125 459 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim52Q8CDV4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms