Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lrif1Q8CDD9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lrif1Q8CDD9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lrif1Q8CDD9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lrif1Q8CDD9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lrif1Q8CDD9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lrif1Q8CDD9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lrif1Q8CDD9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms