Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Gm10253-201ENSMUST00000194270 940 ntBASIC16.87■□□□□ 0.29
Vps53Q8CCB4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps53Q8CCB4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22065-201ENSMUST00000103753 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22066-201ENSMUST00000103761 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24932-201ENSMUST00000103763 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24115-201ENSMUST00000103799 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22190-201ENSMUST00000103827 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22191-201ENSMUST00000103831 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24721-201ENSMUST00000103849 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm28018-201ENSMUST00000103869 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm26399-201ENSMUST00000103937 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm16198-201ENSMUST00000118766 670 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25349-201ENSMUST00000177728 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm23616-201ENSMUST00000177797 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25871-201ENSMUST00000177816 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24752-201ENSMUST00000178240 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24496-201ENSMUST00000178287 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25649-201ENSMUST00000178476 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25548-201ENSMUST00000178681 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm23147-201ENSMUST00000178841 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm26095-201ENSMUST00000179270 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22171-201ENSMUST00000179283 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm23936-201ENSMUST00000179354 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm22619-201ENSMUST00000179516 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25255-201ENSMUST00000179579 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24755-201ENSMUST00000179691 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm26506-201ENSMUST00000179692 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm25086-201ENSMUST00000179931 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm23243-201ENSMUST00000180047 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24659-201ENSMUST00000180212 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm24169-201ENSMUST00000180244 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm23689-201ENSMUST00000180354 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm27359-201ENSMUST00000184153 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm27785-201ENSMUST00000184268 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm27466-201ENSMUST00000184396 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Gm27703-201ENSMUST00000184836 110 ntBASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps53Q8CCB4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms