Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tsen54Q8C2A2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Gm14722-201ENSMUST00000118943 689 ntBASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tsen54Q8C2A2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Tsen54Q8C2A2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tsen54Q8C2A2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Tsen54Q8C2A2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tsen54Q8C2A2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms