Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf3Q8C120 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf3Q8C120 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Gm6973-201ENSMUST00000117080 721 ntBASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf3Q8C120 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf3Q8C120 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms