Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm6433-201ENSMUST00000118634 875 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm6345-202ENSMUST00000180900 204 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm5587-201ENSMUST00000206270 674 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.97□□□□□ -0.49
Smco3Q8BQM7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Gm44454-201ENSMUST00000198541 138 ntBASIC11.96□□□□□ -0.49
Smco3Q8BQM7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco3Q8BQM7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco3Q8BQM7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gm8318-201ENSMUST00000182954 872 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco3Q8BQM7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms