Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srrm4Q8BKA3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Mir6990-201ENSMUST00000183724 91 ntBASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm44335-201ENSMUST00000196879 141 ntBASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm44297-201ENSMUST00000198304 141 ntBASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm44346-201ENSMUST00000198851 141 ntBASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srrm4Q8BKA3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.58□□□□□ -0.39
Srrm4Q8BKA3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Srrm4Q8BKA3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Srrm4Q8BKA3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Gm11543-201ENSMUST00000120758 370 ntBASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Srrm4Q8BKA3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Srrm4Q8BKA3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms