Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Chmp2bQ8BJF9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2bQ8BJF9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms