Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Depdc1bQ8BH88 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Depdc1bQ8BH88 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Depdc1bQ8BH88 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Depdc1bQ8BH88 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Depdc1bQ8BH88 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm16198-201ENSMUST00000118766 670 ntBASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm44872-201ENSMUST00000207864 420 ntBASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Depdc1bQ8BH88 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Depdc1bQ8BH88 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms