Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm15957-201ENSMUST00000118893 974 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm12341-201ENSMUST00000119724 503 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm17150-201ENSMUST00000165577 381 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm27701-201ENSMUST00000184498 110 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm21470-201ENSMUST00000187680 696 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm6266-201ENSMUST00000203844 806 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Npas4Q8BGD7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Gm4804-201ENSMUST00000182234 999 ntBASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Mir7085-201ENSMUST00000184353 66 ntBASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.21■□□□□ 0.03
Npas4Q8BGD7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Npas4Q8BGD7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Npas4Q8BGD7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm5425-201ENSMUST00000214125 459 ntBASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npas4Q8BGD7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Gm28911-201ENSMUST00000188837 117 ntBASIC15.19■□□□□ 0.02
Npas4Q8BGD7 Gm5279-201ENSMUST00000199575 745 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms