Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf40bQ80W14 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gm13829-201ENSMUST00000119600 138 ntBASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.73■□□□□ 0.27
Prpf40bQ80W14 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf40bQ80W14 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm9908-201ENSMUST00000211534 448 ntBASIC16.72■□□□□ 0.27
Prpf40bQ80W14 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf40bQ80W14 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms