Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scn4bQ7M729 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.14□□□□□ -0.15
Scn4bQ7M729 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.14□□□□□ -0.15
Scn4bQ7M729 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.14□□□□□ -0.15
Scn4bQ7M729 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn4bQ7M729 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gm20553-201ENSMUST00000204205 844 ntBASIC14.13□□□□□ -0.15
Scn4bQ7M729 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gm45098-201ENSMUST00000207179 657 ntBASIC14.13□□□□□ -0.15
Scn4bQ7M729 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gm10175-201ENSMUST00000086013 645 ntBASIC14.13□□□□□ -0.15
Scn4bQ7M729 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn4bQ7M729 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms