Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm10275-202ENSMUST00000168697 495 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 AA619741-201ENSMUST00000195095 646 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm10275-201ENSMUST00000092620 635 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubfd1Q78JW9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Gm27437-201ENSMUST00000183429 107 ntBASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubfd1Q78JW9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubfd1Q78JW9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms