Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gm14701-201ENSMUST00000117156 348 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gm44335-201ENSMUST00000196879 141 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gm44297-201ENSMUST00000198304 141 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Gm44346-201ENSMUST00000198851 141 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcc2Q6PDG5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Gm18057-201ENSMUST00000208220 503 ntBASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcc2Q6PDG5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Gm18889-201ENSMUST00000174284 929 ntBASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Gm37230-201ENSMUST00000194491 818 ntBASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcc2Q6PDG5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms