Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm22331-201ENSMUST00000158066 136 ntBASIC16.79■□□□□ 0.28
Scn9aQ62205 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm6013-201ENSMUST00000212264 699 ntBASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm18027-201ENSMUST00000218947 619 ntBASIC16.79■□□□□ 0.28
Scn9aQ62205 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.79■□□□□ 0.28
Scn9aQ62205 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
Scn9aQ62205 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn9aQ62205 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn9aQ62205 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm12384-201ENSMUST00000119228 919 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Mir3547-201ENSMUST00000175461 88 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm27243-201ENSMUST00000183964 521 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn9aQ62205 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm16177-201ENSMUST00000120728 718 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn9aQ62205 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Scn9aQ62205 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn9aQ62205 Efs-202ENSMUST00000227037 2540 ntBASIC16.78■□□□□ 0.28
Scn9aQ62205 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.77■□□□□ 0.28
Scn9aQ62205 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.77■□□□□ 0.28
Scn9aQ62205 Gm45930-201ENSMUST00000221330 292 ntBASIC16.77■□□□□ 0.28
Scn9aQ62205 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Scn9aQ62205 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn9aQ62205 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn9aQ62205 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.77■□□□□ 0.27
Scn9aQ62205 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn9aQ62205 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scn9aQ62205 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Scn9aQ62205 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn9aQ62205 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn9aQ62205 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms